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Newspaper and journal articles in the broad field of microbiology.

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Organic Acid-Based Deep Eutectic Solvents (DESs) are Potent Antimicrobial Agents Against Antibiotic-Resistant Bacteria and Viruses
Highlights Organic acid-based DESs act against colistin- and methicillin-resistant strains. T-glycoline–nanoparticle mix enhances activity against MRSA. Organic DESs eliminate mature biofilms and damage bacterial cells. T-glycoline and oxaline reduce titres of enveloped and non-enveloped viruses. Nanoparticles enhance the safety of DESs. ABSTRACT The escalating threat of antibiotic-resistant bacteria, biofilms and viral contamination in the healthcare and food industries thre
David Ojcius
3 hours ago1 min read


Targeting Cyclic di-AMP Signaling through Diadenylate Cyclase Inhibition Reduces Methicillin Resistance in Clinical MRSA Isolates
HIGHLIGHT Cyclic-di-AMP is a non-canonical driver of methicillin resistance in MRSA Sub-MIC methicillin and biofilms elevate c-di-AMP via DacA upregulation Elevated c-di-AMP activates STING and skews macrophage responses FDA approved drugs Tropinone and eucalyptol identified as DacA inhibitors DacA inhibition restores β-lactam susceptibility in MRSA Abstract Background Methicillin-resistant Staphylococcus aureus (MRSA) remains a major clinical challenge due to persistent β-la
David Ojcius
4 hours ago1 min read


Integrated omics reveal a unique antibacterial mechanism of action for the small molecule HSI#6
Highlights HSI#6 is a rapid, micromolar, broad-spectrum bacteriostatic agent. Triggers immediate, multi-pathway cell envelope stress responses. Drives temporal omics reprogramming toward metabolic shutdown. Shows transcriptomic similarity to ionophores yet a distinct MOA. Exhibits low resistance evolution with compensatory topA mutations. Abstract The continuous risk of antibiotic resistance development underscores the demand for new agents with mechanisms distinct from exist
David Ojcius
2 days ago1 min read


Nutrient-Driven Small-Colony Variants as an Adaptive Outcome in Carbapenem-Resistant Acinetobacter baumannii
Highlights Vitamin B12 induces stable small-colony variants (SCVs) in CRAB. SCVs exhibit reduced cefiderocol killing and regrowth. Mutations affect iron uptake, envelope structure, and metabolism. Co-exposure enriches SCVs with siderophore and BfmRS changes. Nutrients modulate antibiotic efficacy and persistence in CRAB. ABSTRACT Carbapenem-resistant Acinetobacter baumannii (CRAB) is a serious threat, and resistance is emerging to cefiderocol, one of the few remaining treatme
David Ojcius
3 days ago1 min read


Mutations in the superoxide-responsive regulator SoxR confer fluoroquinolone resistance in Stenotrophomonas maltophilia
Highlights soxR mutations cause constitutive activation of SmeVWX and MfsA efflux pumps. Mutations in soxR confer resistant to levofloxacin, a drug option for S. maltophilia. Single R49 substitution activates SoxR and drives multidrug resistance. Abstract Stenotrophomonas maltophilia is a multidrug-resistant Gram-negative opportunistic pathogen. Its antimicrobial resistance arises from intrinsic traits and acquired mechanisms. Overexpression of drug efflux transporters is one
David Ojcius
3 days ago2 min read


Smolstatin1, a unique cystatin-like stefin of Sphaerospora molnari, is essential for parasite development
Highlights Smolstatin1 clusters with other myxozoan cystatin-like stefins Smolstatin1 is upregulated during sporogony and localizes to cell compartments and parasite surface Smolstatin1 inhibits host and parasite cysteine proteases, mainly cathepsin L RNAi-mediated Smolstatin1 knockdown impairs parasite motility and alters cell morphology Smolstatin1 crystallizes as an unusual domain-swapped dimer Abstract Stefins, members of the cystatin superfamily, regulate cysteine protea
David Ojcius
3 days ago1 min read


Uncovering the endophytic bacterial diversity and crop improvement potential under salinity stress in the halophyte Halocnemum strobilaceum
Highlights 76 endophytic bacteria were isolated from Halocnemum strobilaceum from Murcia (Spain). Most isolates (96.05%) exhibited plant growth-promoting traits in vitro. Selected strains in a consortium enhanced Medicago sativa growth under salinity stress. Four novel species for agricultural biotechnological applications were described. Abstract Halophytes are considered promising sources of halophilic and halotolerant bacteria for biotechnological applications in agricultu
David Ojcius
4 days ago2 min read


Antiviral potential of black tea and blueberry extracts against monkeypox virus by targeting orthopoxvirus surface proteins
Highlights First experimental validation for anti-MPXV activity of BTE and BBE BTE/BBE exert synergistic antiviral effects when combined mutually or with 3HP-β-LG Broadens the source diversity of antiviral agents against orthopoxviruses BTE and BBE have promising application in high-risk and resource-limited regions Abstract Monkeypox virus (MPXV) outbreaks primarily affect resource-limited regions in Africa, highlighting an urgent need for low-cost, accessible therapeutics.
David Ojcius
5 days ago1 min read


Dietary soy shapes the microbiome to induce commensal-specific T follicular helper cells and IgA production
Highlights Dietary soy enhances L. reuteri and M. intestinale colonization in the small intestine Dietary soy promotes Tfh cell and IgA responses in the Peyer’s patches of weaning mice L. reuteri provides cognate antigens, while M. intestinale drives IL-1β production Soy-induced IgA is polyreactive and protects against Salmonella infection Summary The commensal microbiota plays a crucial role in shaping mucosal immunity, particularly in the induction of T follicular helper (T
David Ojcius
May 201 min read


Bacterial Warfare at the Molecular Level: Pseudoalteromonas sp. H2 Disrupts Vibrio splendidus Membrane Integrity via ClpP-CheW2 Regulation
Highlights CheW2 negatively regulated the expression of outer membrane proteins in V. splendidus ClpP degraded CheW2 based on the recognization of its AA motif at the N terminal Pseudoalteromonas sp. H2 attenuated the expression of clpP gene of V. splendidus AJ01 Abstract In mariculture ecosystems where Vibrio spp. are predominant pathogens, effective biocontrol through antagonistic probiotics remains an unresolved biological challenge. Here, the Pseudoalteromonas sp. H2 stra
David Ojcius
May 191 min read


Multi-omics analysis-based insights into the microbial community composition & flavor development potentiality of different varieties of sorghum fermented into Sesame flavor Baijiu
Highlights Sesame-flavor Baijiu fermentation was performed using different sorghum varieties. Microbial interactions affected volatile formation differently in sorghum varieties. Cultivar-specific physicochemical traits modulate microbial consortia structure. Sorghum selection can format flavor paradigm and standardize Baijiu quality. Abstract Sorghum is a key raw ingredient in the fermentation of Sesame-flavor Baijiu (SFB). However, studies on the microbial and metabolic dyn
David Ojcius
May 161 min read


Metagenomic profiling of ocular surface microbiome alterations in patients with progressive supranuclear palsy-Richardson’s syndrome
Highlights This study systematically analyzed alterations in the ocular surface microbiome of patients with progressive supranuclear palsy-Richardson’s syndrome (PSP-RS) via metagenomic sequencing, with comparisons to Parkinson’s disease (PD) patients and healthy controls (HC). The β-diversity of the ocular surface microbiome in PSP-RS patients was significantly altered compared to HC, while no such obvious difference was observed in PD patients. PSP-RS patients exhibited inc
David Ojcius
May 162 min read


Manganese Homeostasis Supports Stenotrophomonas maltophilia Oxidative Stress Defense and Replication in Acanthamoeba castellanii Phagosomes
Highlights The S. maltophilia MntH importer contributes to H2O2 resistance and intracellular survival The Mn exporter MntP limits toxicity even at sub-inhibitory Mn²⁺ concentrations The S. maltophilia MntR regulated genes include the extracytoplasmic TBDR-pTFP module The TBDR-pTFP locus is specifically induced under combined Mn2+ and Fe2+ limitation S. maltophilia Mn homeostasis is linked to iron availability and oxidative stress responses ABSTRACT Manganese homeostasis is es
David Ojcius
May 131 min read


Bifidobacterium stercoris KC84 attenuates IBS-D-like symptoms via modulation of serotonin-related pathways and dendritic cell-mediated IFN-β induction
Highlights Bifidobacterium stercoris KC84 alleviates IBS-D-like symptoms in mouse and rat models KC84 modulates serotonin-related pathways associated with diarrhea KC84 induces IFN-β production from colonic dendritic cells IFN-β is associated with reduced intestinal smooth muscle contractility Abstract Irritable bowel syndrome with diarrhea (IBS-D) is a prevalent disorder that significantly impairs quality of life, yet therapeutic advances remain limited. Serotonin dysregulat
David Ojcius
May 111 min read


Maternal helminths rewire the microbiota to promote offspring antiviral immunity
Highlights Maternal helminths promote offspring antiviral immunity via the microbiota Helminth-altered microbiota produce IPA, which drives antiviral protection IPA induces lung epithelial type I interferon responses to promote antiviral immunity Helminth-endemic human microbiota are enriched in the tryptophan metabolism pathway Summary Maternal environmental exposures can alter microbiome composition and lead to changes in offspring immunity. Industrialization has led to sig
David Ojcius
May 101 min read


The clockwork macrophage: Timing in innate immunity
Abstract The circadian clock enables organisms to predict daily environmental changes and synchronise their physiology and behaviour accordingly. Macrophages, key sensor cells in the innate immune system, exhibit cell-autonomous circadian rhythmicity. This circadian rhythmic behaviour is synchronised to the central clock in the hypothalamus as a result of neural, and hormonal signals. Macrophage rhythms and responses involve sensing temporal cues, integrating information from
David Ojcius
May 91 min read


Streptomyces enrichment in roots during drought is uncoupled from plant benefit and is driven by host suppression of iron uptake and immunity
Highlights Streptomyces are enriched in roots during drought via suppressed immunity and Fe uptake Drought-induced suppression of iron uptake is conserved across ∼160 mya of plant evolution Some Streptomyces improve plant performance under drought and low iron Plant benefits are independent of enrichment and instead driven by intra-genus antagonism Summary Drought reshapes the plant root microbiota, yet the mechanistic drivers and consequences of this observation remain uncle
David Ojcius
May 91 min read


New Andes virus isolate haplotype obtained during prospective close contacts follow-up of an Hantavirus cardiopulmonary syndrome fatal case, Chile
Highlights ANDV can be isolated in cell culture only in the absence of neutralizing antibodies. The monitoring of close contacts of ANDV cases allows to identify prospective cases. We isolated a new ANDV human strain from an early blood sample of a secondary case. CHI-Hu13724 is a different haplotype from the previous ANDV reference strains. Isolation of currently zoonotic ANDV strains helps the study of viral pathogenicity. Abstract Andes virus (ANDV) is a zoonotic orthohant
David Ojcius
May 81 min read


An anaerobic pathogen rewires host metabolism to fuel oxidative growth in the inflamed gut
Highlights A classically anaerobic pathogen creates and thrives in a localized oxidative niche BFT rewires epithelial metabolism from oxidative phosphorylation to fermentation Host metabolic rewiring increases lactate and oxygen in the ETBF niche BFT enables ETBF to adapt to this oxidative niche and promote colonization Summary To colonize their host and cause disease, enteric pathogens must deploy their virulence factors to establish distinct nutrient niches. How anaerobic p
David Ojcius
May 21 min read


Transcriptional and cellular reprogramming in Anabaena sp. PCC7120 biofilms: implications for stress response.
Highlights The transition from a planktonic to a sessile lifestyle in Anabaena sp. PCC 7120 is driven by a massive transcriptomic reprogramming involving 17.7% of the genome. Sessile growth involves cell envelope remodeling and lower anabolic activity. While nitrogen deficiency and salinity promote biofilm formation, iron deficiency exerts contrasting effects on sessile development. Stress-adaptation pathways are directly linked to biofilm development. Abstract Cyanobacteria
David Ojcius
May 11 min read
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