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MOSTLY MICROBES AND INFECTIOUS DISEASES
Welcome to Mostly Microbes and Infectious Diseases. David Ojcius posts newspaper and journal articles in the broad field of microbiology.

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Integrated Metagenomic and Metabolomic Analysis Reveals Regional Style Differences in Maotai-Flavour Baijiu
Highlights MT is dominated by Saccharomyces and Lactobacillus. MT has high ester, JS features elevated aldehydes, reflecting regional sensory. Saccharomyces and Pichia correlate with esters. Abstract This research focused on Maotai-flavour Baijiu from three representative production regions in the Chishui River Basin, namely Maotai Town (MT), Jinsha (JS), and Renhuai (RH). By integrating metabolomics and macrogenomics techniques, the study analyzed the differences in volatile
David Ojcius
13 hours ago1 min read


Tn4401/Tn7247 transposon-derived structures driving the cross-transmission of blaKPC among plasmids and chromosomes in clinical carbapenem-resistant Pseudomonas aeruginosa
Highlights A significant proportion (∼11%) of bla KPC genes were chromosome-integrated in P. aeruginosa . Tn 4401 /Tn 7247 -like structures were the major transposons mobilizing bla KPC. Tn 4401 - and Tn 7247 -like structures differed in geographic distribution and plasmid/chromosome localization. IS 26 and IS 6100 formed prevalent chimeric structures with truncated transposons to mobilize bla KPC. Integrative mobilizable elements (IMEs) facilitated inter-cellular trans
David Ojcius
1 day ago2 min read


Circadian rhythms regulate osteoclast recycling through gut microbiota-dependent Th17 cell expansion
Highlights Impairment of circadian rhythm by long-term rest-phase time-restricted feeding (TRF) induces bone loss and gut microbiota dysbiosis in male mice TRF feeding mice showed a decreased Muribaculaceae and propionate in feces Muribaculaceae abundance level is positively correlated with bone mass Fecal microbiota transplantation from TRF donors to germ-free recipients leaded to increased Th17 cell populations Increased Th17 cell populations enhanced osteomorphs fusion
David Ojcius
1 day ago1 min read


Fimbriae potentiate Aggregatibacter actinomycetemcomitans for periodontal disease
Highlights Aggregatibacter actinomycetemcomitans is a causative agent of periodontitis. Fimbriae are key modulators of A. actinomycetemcomitans virulence. Fimbriae drive aggregation, colonization, immune evasion and pathogenicity. Fimbriae limit bacterial vesicle and extracellular cytoplasmic protein release. Fimbriae are key therapeutic targets to control periodontal disease. Abstract Aggregatibacter actinomycetemcomitans is a major contributor to aggressive periodontiti
David Ojcius
1 day ago1 min read


The glutathione pathway is required for biofilm formation in Acinetobacter baumannii
Highlights Glutathione biosynthesis is required for GSH production in A. baumannii Loss of GSH impairs stress resistance and motility gshA, gshB , and gsnoR mutants are sensitive to nitrosative stress and impaired in biofilm formation GSH deficiency alters expression of pili, siderophore, and metabolic genes Exogenous GSH or GSH-containing media restores biofilm formation in mutants Abstract Acinetobacter baumannii is a Gram-negative nosocomial bacterium that is a member
David Ojcius
3 days ago2 min read


Global health burdens of plastics: a lifecycle assessment model from 2016 to 2040
Background Quantifying human health impacts throughout plastics lifecycles can inform global action against pollution that promotes sustainability across environmental, economic, and health concerns. Methods We combined material flow analysis, using the Plastics-to-Ocean model, with lifecycle assessment (LCA) to quantitatively compare disability-adjusted life-years (DALYs) associated with plastics lifecycles, under different global consumption and waste management scenarios b
David Ojcius
3 days ago2 min read


Extreme Temperature Exposure Induces Lung-Gut Dysbiosis in Healthy Mice
Highlights Extreme temperatures caused dysbiosis in lung and gut of mice. Low temperature affects pentanoic and butyric acid production in mice. High temperature promotes intestinal inflammation in mice. Extreme temperatures altered the proteome profile and pathways in the lung and gut of mice. Abstract Climate change has a strong effect on respiratory health, the effects of extreme temperatures on the lung-gut axis remains unclear. This study investigates the impact of extre
David Ojcius
3 days ago2 min read


Pre-existing neutralizing antibodies against cattle-transmitted influenza A virus H5N1 are detectable in unexposed individuals
Highlights H5-naive individuals show low but detectable A/Texas/37/2024-neutralizing IgG Mapping of H5 serum neutralization among 76 historical and recent influenza A strains Isolation of H5/H1 cross-neutralizing monoclonal antibodies targeting the HA stem H5-neutralizing monoclonals protect mice from lethal H5N1 challenge in vivo Summary The transmission of influenza A virus H5N1 clade 2.3.4.4b from cattle to humans highlights the risk of an H5N1 pandemic. Pre-existing immu
David Ojcius
3 days ago1 min read


Activation of the envelope stress-responsive two-component system AmgRS compensates for depletion of the essential lipoprotein signal peptidase LspA in Pseudomonas aeruginosa
Highlights The lipoprotein-specific signal peptidase LspA is essential in Pseudomonas aeruginosa LspA depletion compromises membrane integrity and increases antibiotic susceptibility A gain-of-function mutation in amgS supports growth under LspA-limiting conditions The membrane proteins HtpX and YccA are required for AmgRS-mediated rescue ABSTRACT Bacterial lipoproteins play crucial roles in cell envelope biogenesis, signaling, transport, and virulence, making the enzymes
David Ojcius
3 days ago2 min read


Salivary microbiome diversity is associated with oral health and disease
The oral microbiome is a complex community of bacteria, fungi, and viruses that inhabit the oral cavity. Microbes of the oral microbiome are implicated in health and disease. We collected 220 unstimulated saliva samples from patients with periodontal disease and varying degrees of dental caries, as well as from subjects with no signs of oral disease. Metagenomic analysis of saliva revealed significantly higher abundance of periodontal pathogens in people with gum disease, and
David Ojcius
3 days ago1 min read


Parabacteroides goldsteinii
Parabacteroides goldsteinii is a Gram-negative, obligately anaerobic bacterium belonging to the genus Parabacteroides within the phylum Bacteroidota and family Tannerellaceae. It is a commensal microorganism naturally present in the human gut microbiota and has attracted increasing scientific interests due to its potential roles in metabolic regulation, immune modulation, and host–microbe interactions. Morphology and Characteristics P. goldsteinii is a non-spore-forming, no
David Ojcius
6 days ago1 min read


The lncRNA GAS5-encoded micropeptide facilitates influenza virus replication through modulation of the Wnt/β-catenin signaling pathway
Highlights Influenza virus infection significantly induces the expression of lncRNA GAS5 via type I/III interferons and IL-6 signal pathways. LncRNA GAS5 can encode a critical micropeptide GAS5-P50 which facilitates influenza virus replication. GAS5-p50 interacts with NOTUM to promote the activation of the Wnt/β-catenin pathway. ABSTRACT Long non-coding RNAs (lncRNAs) have been implicated in various cellular processes, including the regulation of gene expression and cellular
David Ojcius
Jan 272 min read


Mangrove cyanobacterial diversity as a source of bioactive natural products
Highlights First global review linking polyphasic taxonomy to cyanobacterial metabolites in mangroves Catalogs cyanobacterial strains recognized only by modern morphological and molecular data Reveals high cyanobacterial diversity across mangrove ecosystem, including novel taxa Highlights diverse bioactivities: antimicrobial, anticancer, toxins, bioplastic Bridges taxonomy with biotech applications in drugs, agrochemicals, dyes, biofuels Abstract Extensive exploration of less
David Ojcius
Jan 261 min read


Pregnenolone promotes immune evasion through blocking endogenous retrovirus expression
Highlights Sexual abstinence activates the hypothalamic-pituitary-adrenal (HPA) axis Sexual abstinence promotes tumor progression by inducing pregnenolone production Pregnenolone facilitates the formation of H3K9me3 to suppress ERV replication Pregnenolone antagonist is a highly promising candidate for anti-tumor therapy Summary Research into steroid hormones shaping tumor biology has gained increasing attention. Using multiple mouse tumor models, we show that pregnenolone pr
David Ojcius
Jan 251 min read


The gut microbiota shapes the human and murine breath volatilome
Highlights The gut metagenome is correlated with a host’s exhaled breath volatilome We devise a method to capture mouse breath using a murine ventilator Gnotobiotic mouse models help identify microbial contributions to exhaled breath The breath volatilome can signal the presence of the asthma-associated species E. sireaum Summary The gut microbiota is crucial to health, yet implementation of microbiota-based therapeutics is limited by the lack of rapid diagnostics. We hypoth
David Ojcius
Jan 231 min read


Loss of cPLA2α function attenuates inflammation and epithelial thickening in a mouse model of Haemophilus influenzae-mediated COPD exacerbation
Highlights Development of mouse model that closely mimics Haemophilus influenzae-mediated COPD exacerbation. Gene targeting approach reveals that cytosolic phospholipase 2-a (cPLA2-a) alters lung inflammatory response using COPD exacerbation experimental model. Also, cPLA2-a contributes to airway epithelium thickening in this clinical manifestation. Novel mechanism of bacterial infection-mediated COPD exacerbation involving cPLA2a. ABSTRACT Among the characteristics of chroni
David Ojcius
Jan 221 min read


History of dental treatments
The history of dental treatments dates back to thousands of years. The scope of this article is limited to the pre-1981 history . The earliest known example of dental caries manipulation is found in a Paleolithic man, dated between 14,160 and 13,820 BP . The earliest known use of a filling after removal of decayed or infected pulp is found in a Paleolithic who lived near modern-day Tuscany , Italy, from 13,000 to 12,740 BP. Although inconclusive, researchers have
David Ojcius
Jan 221 min read


Discovery of BPR2-D2 compound in inhibiting Chikungunya viral RNA synthesis by replicon systems
Highlights BPR2-D2, a coumarin derivative, is able to inhibit Chikungunya virus (CHIKV) RNA replication with a high selective index. BPR2-D2 can inhibit replication of Sindbis virus, which is an arthritogenic alphavirus as CHIKV The CHIKV replicon systems, which can be surrogates for studying CHIKV RNA replication, are applicable and convenient for antiviral screening. ABSTRACT Chikungunya virus (CHIKV), an alphavirus in the Togaviridae family, is transmitted to humans thro
David Ojcius
Jan 211 min read


Omics-Based Dissection of Alternative Splicing and the Regulatory Architecture in Fungal Genomes
Highlights Alternative splicing has been implicated in the regulation of a variety of genes Intron retention is the most frequent alternative splicing event in fungi We critically identified the gaps in the role of alternative splicing in fungi We proposed a practical roadmap to fill these gaps. ABSTRACT Assigning mechanistic and functional associations to most of the widespread splicing diversity in fungi has been one of the continuous and most intriguing challenges in the f
David Ojcius
Jan 202 min read


Boswellia serrata Extract and Its Bioactive Compound, 3-O-Acetyl-11-Keto-β-Boswellic Acid (AKBA), Induce ROS-Mediated Intracellular Clearance of Porphyromonas gingivalis in Gingival Epithelial Cells
Porphyromonas gingivalis is a keystone pathogen in periodontitis, known for its ability to invade gingival epithelial cells and persist intracellularly. Conventional antimicrobials are often ineffective against intracellular pathogens, and natural products remain poorly explored in this context. Here, we investigated the antimicrobial effects of Boswellia serrata extract and its bioactive compounds on the dynamics of P. gingivalis infection in human gingival epithelial
David Ojcius
Jan 191 min read
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